Atahaulpa editing while hosting with Yahoo (Is this a problem?)

Hello everyone,

Thanks for the great theme. I really like it. Now if I can only figure out what the heck I'm doing with it - lol

My domain is hosted with Yahoo. For some reason, when I edit my theme with the atahaulpa theme editor in the design tab, some of my pages don't change. Sometimes some of the elements change and others do not. Then I have the situation where the other pages change and the home page does not change. Is this because my page is as such: http://baloneysandwiches.com/ (for first page which is the direct link to my domain) - and - http://baloneysandwiches.com/blog1/ (for the other pages). Does this have something to do with my file manager with yahoo? Are there a lot of problems with theme manipulation and hosting with yahoo? I even started over and reloaded the theme after screwing it all up and tried to edit just the "Logo" to get rid of the "Logo gif" and it disappeared on the subsequent pages, but not on the direct link page.

Also, using the theme editor, how do you put frames or colored boxes around individual posts.