How did you do the upgrade? It is a simple matter
1) download the latest version and unzip it - this should give ou a flder called 'atahualpa344' or 343 or 342 depending on the folder
2) If you added any images to the 'images/header' folder copy them in to the new version (atahualpa/images/header)
3) upload the folder (atahualpa344) to your host in the wp-content/themes' folder.
4) go to the site dashboard->appearances->themes and activate the new version
All the settings from the previous release should be there. NOTE, if you hard coded any url's you may want to review that they are still correct.
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Juggledad | Forum Moderator/Support